Jaewoon Jung

Education

B.S. (1998) Korea Advanced Institute of Science and Technology (KAIST) (Physics and Mathematics, Natural Science)
M.S. (2000) KAIST (Physics, Natural Science)
Ph.D. (2005) KAIST (Physics, Natural Science)
Thesis: “Determination of unfolding rate and Identification of protein structure”

Professional Experience

  • Postdoctoral Associate, Chemistry Department, Korea Advanced Institute of Science and Technology, March 2005 – February 2006
  • Postdoctoral Associate, Graduate School of Information Science, Nagoya University, March 2006 - March 2009
  • Assistant Professor Extraordinary, Graduate School of Engineering, Kobe University, April 2009 - March 2010
  • Assistant Professor Extraordinary, Graduate School of System Informatics, Kobe University, April 2010 - Present

Area of Specialization

  1. Quantum Mechanics/Molecular Mechanics (QM/MM)
  2. Development of parallel computation algorithms
  3. Protein folding/unfolding and protein structure prediction

Publications

  • “Møller-Plesset perturbation theory gradient in the generalized hybrid orbital quantum mechanical and molecular mechanical method”,  J. Jung, Y. Sugita, and S. Ten-no, J. Chem. Phys. 132 084106 (2010) (6 pages)
  • “Assessemnt of free energy expression in RISM integral equation theory: Theoretical prediction of partition coefficients revisited”,  S. Ten-no, J. Jung, H. Chuman, and Y. Kawashima, Mol. Phys. 108 327-332 (2010)
  • “Topological quantities determining the folding/unfolding rate of two-state folding proteins”,  J. Jung, A. J. Buglas, and E. Lee J. Sol. Chem. In press
  • “Simple avoidance of Pauli repulsion errors in the generalized hybrid orbital (GHO) method”,  J. Jung and S. Ten-no Chem. Phys. Lett. 484 344-348 (2010)
  • “A two-dimensional energy surface of the phosphoryl transfer reaction catalyzed by phosphoserine phosphatase”,  S. Re, J. Jung, S. Ten-no, and Y. Sugita, Chem. Phys. Lett. 480 284-288 (2009)
  • “New implementation of a combined quantum mechanical and molecular mechanical method using modified generalized hybrid orbitals”,  J. Jung, C. H. Choi, Y. Sugita, and S. Ten-no, J. Chem. Phys. 127 204102 (2007) (12 pages)
  • “Topological Determinants of protein unfolding rates”, J. Jung, J. Lee and H. T. Moon, Proteins 58 389-395 (2005)
  • “Identification of the Protein Native Structure by Using a Sequence-Dependent Feature in Contact Maps”, J. Jung, J. Lee and H. T. Moon, J. Korean Phys. Soc. 46 625-630 (2005)